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Steidinger, B. S., Crowther, T. W., Liang, J., Van Nuland, M. E., Werner, G. D. A., Reich, P. B., et al. (2019). Climatic controls of decomposition drive the global biogeography of forest-tree symbioses. Nature, 569(7756), 404–408.
Abstract: The identity of the dominant root-associated microbial symbionts in a forest determines the ability of trees to access limiting nutrients from atmospheric or soil pools 1,2 , sequester carbon 3,4 and withstand the effects of climate change 5,6 . Characterizing the global distribution of these symbioses and identifying the factors that control this distribution are thus integral to understanding the present and future functioning of forest ecosystems. Here we generate a spatially explicit global map of the symbiotic status of forests, using a database of over 1.1 million forest inventory plots that collectively contain over 28,000 tree species. Our analyses indicate that climate variables—in particular, climatically controlled variation in the rate of decomposition—are the primary drivers of the global distribution of major symbioses. We estimate that ectomycorrhizal trees, which represent only 2% of all plant species 7 , constitute approximately 60% of tree stems on Earth. Ectomycorrhizal symbiosis dominates forests in which seasonally cold and dry climates inhibit decomposition, and is the predominant form of symbiosis at high latitudes and elevation. By contrast, arbuscular mycorrhizal trees dominate in aseasonal, warm tropical forests, and occur with ectomycorrhizal trees in temperate biomes in which seasonally warm-and-wet climates enhance decomposition. Continental transitions between forests dominated by ectomycorrhizal or arbuscular mycorrhizal trees occur relatively abruptly along climate-driven decomposition gradients; these transitions are probably caused by positive feedback effects between plants and microorganisms. Symbiotic nitrogen fixers—which are insensitive to climatic controls on decomposition (compared with mycorrhizal fungi)—are most abundant in arid biomes with alkaline soils and high maximum temperatures. The climatically driven global symbiosis gradient that we document provides a spatially explicit quantitative understanding of microbial symbioses at the global scale, and demonstrates the critical role of microbial mutualisms in shaping the distribution of plant species. © 2019, The Author(s), under exclusive licence to Springer Nature Limited.
Keywords: Fungi
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Dejean, A., & Lachaud, J. P. (2011). The hunting behavior of the African ponerine ant Pachycondyla pachyderma. Behav. Processes, 86(2), 169–173.
Abstract: The hunting behavior of the African ponerine ant Pachycondyla pachyderma, a semi-specialized centipede predator, appears well adapted to this kind of prey and shows a graded complexity according to the difficulty it has in overwhelming prey. Small prey (5-to-8-mm-long termites) were detected by contact and seized by the thorax while larger prey (>= 30-mm-long centipedes) were frequently detected from a distance and seized by the anterior-most part of their body. Termites and 30-mm-long lithobiomorph centipedes were not always stung, whereas stinging and even repeated stinging was needed for 50-mm-long geophilomorphs and scolopendromorphs. Moreover, overwhelming wide and heavy scolopendromorphs, which have better defensive abilities, involved the use of additional behaviors allowing the workers to capture them safely: venom spreading, and a peculiar stinging posture, the “fatal embrace”. Here the workers seize scolopendromorphs by an antenna or by one of their first legs, wrap themselves around the prey while maintaining their grip with their mandibles and legs, and slowly inject venom into the prey's ventral surface. Workers retrieve small prey solitarily while, for large geophilomorphs and scolopendromorphs, nestmates can be recruited at short range or even at long range through tandem running. (C) 2010 Elsevier B.V. All rights reserved.
Keywords: Hunting behavior; Feeding specialization; Behavioral flexibility; Ponerine ants; Pachycondyla; Myriapoda
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Picard, N., Gourlet-Fleury, S., & Sist, P. (2003). Using process-dependent groups of species to model the dynamics of a tropical rainforest. Modelling Forest Systems, , 237–248.
Abstract: The high tree species diversity in tropical forests is difficult to take into account in models. The usual solution consists of defining groups of species and then adjusting a set of parameters for each group. In this study, we address this issue by allowing a species to move from one species group to another, depending on the biological process that is concerned. We developed this approach with a matrix model of forest dynamics, for a tropical rainforest in French Guiana, at Paracou, focusing on the methodological aspects. The forest dynamics is split into three components: recruitment, growth and mortality. We then built five recruitment groups, five growth groups and five mortality groups. One species is characterized by a combination of the three groups, thus yielding in total 5 X 5 X 5 = 125 possibilities, out of which 43 are actually observed. The resulting matrix model provides a better view of the floristic composition of the forest, and does not have more parameters than it would have with five global species groups. However, its predictions are no more precise than those of the matrix model based on five global groups.
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Picard, N., Mortier, F., Rossi, V., & Gourlet-Fleury, S. (2010). Clustering species using a model of population dynamics and aggregation theory. Ecol. Model., 221(2), 152–160.
Abstract: The high species diversity of some ecosystems like tropical rainforests goes in pair with the scarcity of data for most species. This hinders the development of models that require enough data for fitting. The solution commonly adopted by modellers consists in grouping species to form more sizeable data sets. Classical methods for grouping species such as hierarchical cluster analysis do not take account of the variability of the species characteristics used for clustering. In this study a clustering method based on aggregation theory is presented. It takes account of the variability of species characteristics by searching for the grouping that minimizes the quadratic error (square bias plus variance) of some model's prediction. This method allows one to check whether the gain in variance brought by data pooling compensate for the bias that it introduces. This method was applied to a data set on 94 tree species in a tropical rainforest in French Guiana, using a Usher matrix model to predict species dynamics. An optimal trade-off between bias and variance was found when grouping species. Grouping species appeared to decrease the quadratic error, except when the number of groups was very small. This clustering method yielded species groups similar to those of the hierarchical cluster analysis using Ward's method when variance was small, that is when the number of groups was small. (C) 2009 Elsevier B.V. All rights reserved.
Keywords: Aggregation theory; Species grouping; Species richness; Tropical rainforest; Usher model
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Gourlet-Fleury, S., Blanc, L., Picard, N., Sist, P., Dick, J., Nasi, R., et al. (2005). Grouping species for predicting mixed tropical forest dynamics: looking for a strategy. Ann. For. Sci., 62(8), 785–796.
Abstract: The high species diversity of mixed tropical forests hinders the development of forest dynamic models. A solution commonly adopted is to cluster species in groups. There are various methods for grouping species that can be linked to three strategies (i) the ecological subjective strategy, (ii) the ecological data-driven strategy, and (iii) the dynamic process strategy. In the first two strategies a species will be assigned to a single group while in the latter strategy, a specific grouping is defined for each process of population dynamics ( typically based on recruitment, growth, mortality). Little congruency or convergence is observed in the literature between any two classifications of species. This may be explained by the independence between the sets of tree characters used to build species groups, or by the intra-specific variability of these characters. We therefore recommend the dynamic process strategy as the most convenient strategy for building groups of species.
Keywords: cross-comparisons; functional groups; modelling strategy; species classifications
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Brechet, L., Ponton, S., Roy, J., Freycon, V., Couteaux, M. M., Bonal, D., et al. (2009). Do tree species characteristics influence soil respiration in tropical forests? A test based on 16 tree species planted in monospecific plots. Plant Soil, 319(1-2), 235–246.
Abstract: The high spatial variability of soil respiration in tropical rainforests is well evaluated, but influences of biotic factors are not clearly understood. This study underlines the influence of tree species characteristics on soil respiration across a 16-monospecific plot design in a tropical plantation of French Guiana. A large variability of soil CO2 fluxes was observed among plots (i.e. 2.8 to 6.8 μmol m(-2) s(-1)) with the ranking being constant across seasons. There were no significant relationships between soil respiration and soil moisture or soil temperature, neither spatially, nor seasonally. The variability of soil respiration was mainly explained by quantitative factors such as leaf litterfall and basal area. Surprisingly, no significant relationship was observed between soil respiration and root biomass. However, the influence of substrate quality was revealed by a strong relationship between soil respiration and litterfall P (and litterfall N, to a lesser extent).
Keywords: Fine root; Litter quality; Nutrient cycling; Plant soil interactions; Soil respiration; Tropical plantations
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Legeay, J., Husson, C., Boudier, B., Louisanna, E., Baraloto, C., Schimann, H., et al. (2020). Surprising low diversity of the plant pathogen Phytophthora in Amazonian forests. Environ. Microbiol., 22(12), 5019–5032.
Abstract: The genus Phytophthora represents a group of plant pathogens with broad global distribution. The majority of them cause the collar and root-rot of diverse plant species. Little is known about Phytophthora communities in forest ecosystems, especially in the Neotropical forests where natural enemies could maintain the huge plant diversity via negative density dependence. We characterized the diversity of soil-borne Phytophthora communities in the North French Guiana rainforest and investigated how they are structured by host identity and environmental factors. In this little-explored habitat, 250 soil cores were sampled from 10 plots hosting 10 different plant families across three forest environments (Terra Firme, Seasonally Flooded and White Sand). Phytophthora diversity was studied using a baiting approach and metabarcoding (High-Throughput Sequencing) on environmental DNA extracted from both soil samples and baiting-leaves. These three approaches revealed very similar communities, characterized by an unexpected low diversity of Phytophthora species, with the dominance of two cryptic species close to Phytophthora heveae. As expected, the Phytophthora community composition of the French Guiana rainforest was significantly impacted by the host plant family and environment. However, these plant pathogen communities are very small and are dominated by generalist species, questioning their potential roles as drivers of plant diversity in these Amazonian forests. © 2020 Society for Applied Microbiology and John Wiley & Sons Ltd.
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Boulogne, I., Constantino, R., Amusant, N., Falkowski, M., Rodrigues, A. M. S., & Houel, E. (2017). Ecology of termites from the genus Nasutitermes (Termitidae: Nasutitermitinae) and potential for science-based development of sustainable pest management programs. Journal of Pest Science, 90(1), 19–37.
Abstract: The genus Nasutitermes is among the most abundant wood-feeding Termitidae and an extremely diverse and heterogeneous group in terms of its biogeography and morphology. Despite the major role of several Nasutitermes species as structural pests, the phylogenetic status of this genus is still unclear, along with a confused taxonomy and species identification remaining difficult. The first aim of this review was thus to gather and discuss studies concerning the taxonomic status of the genus Nasutitermes in order to clarify this crucial point. Then, our goal was to gain new insights into the management of N. corniger, considered to be the most economically detrimental pest of this genus in South America and a Nasutitermes model species, while filtering available information concerning its biology through the prism of termite control, as well as critically examine the existing methods. We indeed strongly believe that increasing our knowledge of this species’ biological strategies is the key to progress in the challenging question of their sustainable management. © 2016, Springer-Verlag Berlin Heidelberg.
Keywords: Antimicrobial and insecticidal botanical extracts; Ipm; Nasutitermes corniger; Sustainable management; Taxonomic history; Termitidae
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Clair, B., Gril, J., Baba, K., Thibaut, B., & Sugiyama, J. (2005). Precautions for the structural analysis of the gelatinous layer in tension wood. IAWA J., 26(2), 189–195.
Abstract: The gelatinous layer (G-layer) of tension wood fibres in hardwood contributes to the mechanical function of the living tree and has significant consequences on properties of solid wood. Its size, shape and structure observed by optical or electron microscopy exhibits characteristic anatomical features. However, we found that sectioning of non-embedded wood samples results in an uncontrolled swelling of the G-layer. In order to assess this artefact, the shape and thickness of the G-layer was monitored by serial sections from an embedded wood sample, from its trimmed transverse face to that located several hundreds of micrometres deep. The results revealed that the initial cutting before embedding produced a border effect responsible for the swollen nature, which is similar to sections from non-embedded material. After a conventional embedding technique was applied, a section of at least 30 micrometres below the trimming surface is required to observe an un-swollen G-layer.
Keywords: artefact; fibre wall; gelatinous layer (G-layer); tension wood
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Fargeon, H., Aubry-Kientz, M., Brunaux, O., Descroix, L., Gaspard, R., Guitet, S., et al. (2016). Vulnerability of commercial tree species to water stress in logged forests of the Guiana shield. Forests, 7(5).
Abstract: The future of tropical managed forests is threatened by climate change. In anticipation of the increase in the frequency of drought episodes predicted by climatic models for intertropical regions, it is essential to study commercial trees' resilience and vulnerability to water stress by identifying potential interaction effects between selective logging and stress due to a lack of water. Focusing on 14 species representing a potential or acknowledged commercial interest for wood production in the Guiana Shield, a joint model coupling growth and mortality for each species was parametrized, including a climatic variable related to water stress and the quantity of aboveground biomass lost after logging. For the vast majority of the species, water stress had a negative impact on growth rate, while the impact of logging was positive. The opposite results were observed for the mortality. Combining results from growth and mortality models, we generate vulnerability profiles and ranking from species apparently quite resistant to water stress (Chrysophyllum spp., Goupia glabra Aubl., Qualea rosea Aubl.), even under logging pressure, to highly vulnerable species (Sterculia spp.). In light of our results, forest managers in the Guiana Shield may want to conduct (i) a conservation strategy of the most vulnerable species and (ii) a diversification of the logged species. Conservation of the already-adapted species may also be considered as the most certain way to protect the tropical forests under future climates. © 2016 by the authors.
Keywords: Climate change; Growth rates; Mortality rates; Paracou; Selective logging
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